R/sensi_plot.sensiINTER_Influ.R
sensi_plot.sensiTree_Influ.Rdsensi_plot.sensiTree_Influ Plot results from tree_influ_phylm and
tree_influ_phyglm
# S3 method for sensiTree_Influ sensi_plot(x, graphs = "all", ...)
| x | output from |
|---|---|
| graphs | choose which graph should be printed on the output ("all", 1,2,3 or 4) |
| ... | further arguments to methods |
For 'x' from sensiTree_Influ_phylm or sensiTree_Influ_phyglm:
Graph 1: Most common influential species on model estimates. Percentage of iterations (n.tree or n.intra) where the removal of individual species caused significant change in model estimate (sDIFestimate > cutoff).
Graph 2: Shift on model estimate after species removal for most influential species. Small red dots represent individual reruns between different trees or simulations while large red dots represent the average DIFestimate among all iterations.