R/sensi_plot.sensiInflu.R
sensi_plot.sensiInflu.Rdplot_influ_phylm Plot results from influ_phylm and
influ_phyglm
# S3 method for sensiInflu sensi_plot(x, graphs = "all", param = "estimate", ...)
| x | output from |
|---|---|
| graphs | choose which graph should be printed on the output ("all", 1,2,3 or 4) |
| param | choose which parameter ("intercept" or "estimate" should be printed) |
| ... | further arguments to methods |
For 'x' from influ_phylm or influ_phyglm:
Graph 1: Distribution of estimated slopes (estimates) or intercepts for each simulation (leave-one-out deletion). Red vertical line represents the original slope or intercept from the full model (with all species).
Graph 2: Original regression plot (\(trait~predictor\)). Standardized difference in slope or intercept is represented by a continuous size scale. The names of the most influential species (sDF > cutoff) are ploted in the graph.
Graph 3: Distribution of standardized difference in slope or intercept. Red
colour indicates influential species (with a standardised difference above
the value of cutoff).
Graph 4: Distribution of the percentage of change in slope or intercept.