Graphical diagnostics for class 'intra.physig'

Source: R/sensi_plot.tree.physig.R

sensi_plot_intra.physig Plot results from intra_physig.

# S3 method for intra.physig
sensi_plot(x, graphs = "all", ...)

Arguments

x

output from intra_physig
graphs

choose which graph should be printed in the output ("all", 1 or 2)
...

further arguments to methods

Details

For 'x' from intra_physig

Graphs 1: Distribution of estimated phylogenetic signal (lambda or K) for each simulation Red vertical line represents the average signal among all estimates.

Graph 2: Distribution of p-values for the phylogenetic signal (K or lambda) for each simulation. Red vertical line represents the alpha significance level = 0.05.

See also

ggplot, intra_phylm intra_phylm