An implementation of sensitivity analysis for phylogenetic comparative methods. The package is an umbrella of statistical and graphical methods that estimate and report different types of uncertainty in PCM: (i) Species Sampling uncertainty (sample size; influential species and clades). (ii) Phylogenetic uncertainty (different topologies and/or branch lengths). (iii) Data uncertainty (intraspecific variation and measurement error).
https://github.com/paternogbc/sensiPhy/issues.
You can find instructions on how to contribute to sensiPhy at this link: https://github.com/paternogbc/sensiPhy/wiki/How-to-support-sensiPhy
A quick tutorial is available at this link: https://github.com/paternogbc/sensiPhy/wiki
Paterno, G. B., Penone, C. Werner, G. D. A. sensiPhy: An r-package for sensitivity analysis in phylogenetic comparative methods. Methods in Ecology and Evolution 2018, 9(6):1461-1467.